Uses of Enum Class
org.snpeff.snpEffect.VariantEffect.EffectImpact
Packages that use VariantEffect.EffectImpact
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Uses of VariantEffect.EffectImpact in org.snpeff.interval.codonChange
Methods in org.snpeff.interval.codonChange with parameters of type VariantEffect.EffectImpactModifier and TypeMethodDescriptionprotected VariantEffectCodonChange.effectNoCodon(Marker marker, EffectType effectType, VariantEffect.EffectImpact effectImpact) -
Uses of VariantEffect.EffectImpact in org.snpeff.snpEffect
Fields in org.snpeff.snpEffect declared as VariantEffect.EffectImpactFields in org.snpeff.snpEffect with type parameters of type VariantEffect.EffectImpactModifier and TypeFieldDescriptionprotected List<VariantEffect.EffectImpact>VariantEffect.effectImpactsMethods in org.snpeff.snpEffect that return VariantEffect.EffectImpactModifier and TypeMethodDescriptionEffectType.effectImpact()Return effect impactVariantEffect.getEffectImpact()Return impact of this effectVariantEffects.highestImpact(String trId) Find the highest impact effect for transcript 'trId'static VariantEffect.EffectImpactReturns the enum constant of this class with the specified name.static VariantEffect.EffectImpact[]VariantEffect.EffectImpact.values()Returns an array containing the constants of this enum class, in the order they are declared.Methods in org.snpeff.snpEffect with parameters of type VariantEffect.EffectImpactModifier and TypeMethodDescriptionvoidVariantEffects.add(Variant variant, Marker marker, EffectType effectType, VariantEffect.EffectImpact effectImpact, String message) Add an effectvoidVariantEffect.addEffectImpact(VariantEffect.EffectImpact effectImpact) booleanVariantEffect.hasEffectImpact(VariantEffect.EffectImpact effectImpact) voidVariantEffect.set(Marker marker, EffectType effectType, VariantEffect.EffectImpact effectImpact, String message) voidVariantEffect.setEffectImpact(VariantEffect.EffectImpact effectImpact) Constructors in org.snpeff.snpEffect with parameters of type VariantEffect.EffectImpactModifierConstructorDescriptionVariantEffect(Variant variant, Marker marker, EffectType effectType, VariantEffect.EffectImpact effectImpact, String codonsOld, String codonsNew, int codonNum, int codonIndex, int cDnaPos) -
Uses of VariantEffect.EffectImpact in org.snpeff.vcf
Methods in org.snpeff.vcf that return VariantEffect.EffectImpactMethods in org.snpeff.vcf with parameters of type VariantEffect.EffectImpact