Depolymerisation (SnpEff 5.2 API)

java.lang.Object

org.snpeff.reactome.Entity

org.snpeff.reactome.events.Event

org.snpeff.reactome.events.Reaction

org.snpeff.reactome.events.Depolymerisation

All Implemented Interfaces:: Comparable<Entity>

public class Depolymerisation extends Reaction

A depolymerization event

Author:: pcingola

Nested Class Summary

Nested classes/interfaces inherited from class org.snpeff.reactome.events.Reaction
Reaction.RegulationType

Nested classes/interfaces inherited from class org.snpeff.reactome.Entity
Entity.TransferFunction
Field Summary

Fields inherited from class org.snpeff.reactome.events.Reaction
catalyst, inputs, MAX_WEIGHT_SUM, outputs, regulator

Fields inherited from class org.snpeff.reactome.Entity
BETA, compartment, debug, fixedOutput, geneIds, id, name, output, TRANSFER_FUNCTION, weight
Constructor Summary

Constructors

Constructor

Description

Depolymerisation(int id, String name)
Method Summary

Methods inherited from class org.snpeff.reactome.events.Reaction
addCatalyst, addInput, addOutput, addRegulator, addRegulator, calc, getCatalyst, getInputs, getOutputs, getRegulator, isReaction, scaleWeights, toString, toString, transferFunction

Methods inherited from class org.snpeff.reactome.Entity
addGeneId, calc, compareTo, getCompartment, getGeneIds, getId, getName, getOutput, getWeight, hasOutput, isFixed, reset, setCompartment, setFixedOutput, setWeight, toStringSimple, transferFunction

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details
- Depolymerisation
  
  public Depolymerisation(int id, String name)