Uses of Class org.snpeff.coverage.CountFragments (SnpEff 5.2 API)

Packages that use CountFragments

Package

Description

org.snpeff.coverage

Uses of CountFragments in org.snpeff.coverage

Methods in org.snpeff.coverage that return CountFragments

Modifier and Type

Method

Description

static CountFragments

CountFragments.calculateFromSam(String samFile, boolean verbose)

Calculate coverage from a SAM file