Package com.pixelmed.convert

Class NIfTI1Header

java.lang.Object
com.pixelmed.convert.NIfTI1Header
public class NIfTI1Header extends Object

A class for extracting NIfTI-1 image input format headers.

  • Field Details

    • FIXED_HEADER_LENGTH

      public static final int FIXED_HEADER_LENGTH
      See Also:

    • MAGIC_OFFSET

      public static final int MAGIC_OFFSET
      See Also:

    • bytes

      public byte[] bytes

    • bigEndian

      public boolean bigEndian

    • sizeof_hdr

      public int sizeof_hdr

    • dim_info

      public byte dim_info

    • dim

      public short[] dim

    • intent_p1

      public float intent_p1

    • intent_p2

      public float intent_p2

    • intent_p3

      public float intent_p3

    • intent_code

      public short intent_code

    • intent

      public com.pixelmed.convert.NIfTI1Header.Intent intent

    • datatype_code

      public short datatype_code

    • datatype

      public com.pixelmed.convert.NIfTI1Header.DataType datatype

    • bitpix

      public short bitpix

    • slice_start

      public short slice_start

    • pixdim

      public float[] pixdim

    • vox_offset

      public float vox_offset

    • scl_slope

      public float scl_slope

    • scl_inter

      public float scl_inter

    • slice_end

      public short slice_end

    • slice_code

      public byte slice_code

    • slice_order

      public com.pixelmed.convert.NIfTI1Header.SliceOrder slice_order

    • xyzt_units_code

      public byte xyzt_units_code

    • xyzt_units_code_spatial

      public byte xyzt_units_code_spatial

    • xyzt_units_spatial

      public com.pixelmed.convert.NIfTI1Header.Units xyzt_units_spatial

    • xyzt_units_code_temporal

      public byte xyzt_units_code_temporal

    • xyzt_units_temporal

      public com.pixelmed.convert.NIfTI1Header.Units xyzt_units_temporal

    • cal_max

      public float cal_max

    • cal_min

      public float cal_min

    • slice_duration

      public float slice_duration

    • toffset

      public float toffset

    • description

      public byte[] description

    • aux_file

      public byte[] aux_file

    • qform_code

      public short qform_code

    • qform

      public com.pixelmed.convert.NIfTI1Header.CoordinateTransform qform

    • sform_code

      public short sform_code

    • sform

      public com.pixelmed.convert.NIfTI1Header.CoordinateTransform sform

    • quatern_b

      public float quatern_b

    • quatern_c

      public float quatern_c

    • quatern_d

      public float quatern_d

    • qoffset_x

      public float qoffset_x

    • qoffset_y

      public float qoffset_y

    • qoffset_z

      public float qoffset_z

    • srow_x

      public float[] srow_x

    • srow_y

      public float[] srow_y

    • srow_z

      public float[] srow_z

    • intent_name

      public byte[] intent_name

    • magic

      public byte[] magic

  • Constructor Details

  • Method Details

    • isNIfTI1SingleFileMagicNumber

      public static boolean isNIfTI1SingleFileMagicNumber(byte[] bytes, int offset)

    • isNIfTI1DualFileMagicNumber

      public static boolean isNIfTI1DualFileMagicNumber(byte[] bytes, int offset)

    • isNIfTI1SingleFileMagicNumber

      public boolean isNIfTI1SingleFileMagicNumber()

    • isNIfTI1DualFileMagicNumber

      public boolean isNIfTI1DualFileMagicNumber()

    • getImageDataFile

      public static File getImageDataFile(File headerFile)

    • main

      public static void main(String[] arg)

      Read a NIfTI-1 image input format files and dump header.

      Parameters:
      arg - the inputFile,