| Package | Description |
|---|---|
| pal.mep |
Classes for the analysis of "measurably evolving populations" (mep).
|
| pal.treesearch |
| Class and Description |
|---|
| ConstraintModel |
| Class and Description |
|---|
| AbstractLeafNode |
| AbstractParentableConstrainedNode |
| BranchAccess |
| ConstrainedNode |
| ConstrainedNode.HeightAdjustment |
| ConstraintModel |
| ConstraintModel.GroupManager |
| FreeBranch |
| FreeNode |
| GeneralConstraintGroupManager |
| GeneralConstraintGroupManager.LikelihoodScoreAccess |
| GeneralConstraintGroupManager.Store |
| GeneralConstructionTool |
| GeneralOptimisable |
| GeneralTreeComponent |
| GroupLeader
Title: GroupLeader
|
| HeightInformationUser
Title: HeightInformationUser
|
| NodeAccess |
| ParentableConstrainedNode |
| PivotNode |
| RootAccess |
| SearchMonitor
Title: SearchMonitor
|
| UnrootedMLSearcher |