Field Detail

• NODE_HEIGHT_SE

  static final java.lang.String NODE_HEIGHT_SE

  attribute name for the standard error on a node's height.

  See Also:

  Constant Field Values

• CLADE_PROBABILITY

  static final java.lang.String CLADE_PROBABILITY

  attribute name for the probability of the clade defined by an internal node.

  See Also:

  Constant Field Values

• SUBTREE_PROBABILITY

  static final java.lang.String SUBTREE_PROBABILITY

  attribute name for the probability of the subtree defined by an internal node.

  See Also:

  Constant Field Values

• MEAN_CLADE_HEIGHT

  static final java.lang.String MEAN_CLADE_HEIGHT

  attribute name for the mean height of this clade in a group of trees.

  See Also:

  Constant Field Values

Method Detail

• setAttribute

  void setAttribute(java.lang.String name,
                    java.lang.Object value)

  Sets a named attribute to the given value.

  Parameters:

  name - the name of the attribute

  value - the value to set the attribute

• getAttribute

  java.lang.Object getAttribute(java.lang.String name)

  Parameters:

  name - the name of the attribute.

  Returns:

  the attribute with the given name or null if it doesn't exist.

• getAttributeNames

  java.util.Enumeration getAttributeNames()

  Returns:

  an enumeration of the attributes that this node has.