RateMatrixUtils

java.lang.Object
- pal.substmodel.RateMatrixUtils

```
public class RateMatrixUtils
extends java.lang.Object
```
Version:

$Id: RateMatrixUtils.java,v 1.2 2001/07/13 14:39:13 korbinian Exp $

Author:

Korbinian Strimmer, Alexei Drummond, Matthew Goode

Constructor Summary

Constructors
Constructor and Description

RateMatrixUtils()

Constructors
Constructor and Description
`RateMatrixUtils()`

Method Summary

All Methods Static Methods Concrete Methods
Modifier and Type	Method and Description
`static RateMatrix[]`	`getCopy(RateMatrix[] toCopy)`
`static RateMatrix`	`getInstance(int typeID, int modelID, double[] params, double[] freq)` Create rate matrix given model and data type codes

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- RateMatrixUtils
```
public RateMatrixUtils()
```

Method Detail

getInstance

public static RateMatrix getInstance(int typeID,
                                     int modelID,
                                     double[] params,
                                     double[] freq)

Create rate matrix given model and data type codes

Parameters:: typeID - code for data type; modelID - code for model of substitution; params - model parameters; freq - model frequencies
Returns:: rate matrix

getCopy

public static final RateMatrix[] getCopy(RateMatrix[] toCopy)

Class RateMatrixUtils

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

RateMatrixUtils

Method Detail

getInstance

getCopy