Uses of Interface
jebl.evolution.coalescent.IntervalList
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Packages that use IntervalList Package Description jebl.evolution.coalescent -
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Uses of IntervalList in jebl.evolution.coalescent
Classes in jebl.evolution.coalescent that implement IntervalList Modifier and Type Class Description classIntervalsA concrete class for a set of coalescent intevals.Methods in jebl.evolution.coalescent with parameters of type IntervalList Modifier and Type Method Description static doubleCoalescent. calculateAnalyticalLogLikelihood(IntervalList intervals)Calculates the log likelihood of this set of coalescent intervals, using an analytical integration over theta.static doubleCoalescent. calculateLogLikelihood(IntervalList intervals, DemographicFunction demographicFunction)Calculates the log likelihood of this set of coalescent intervals, given a demographic model.static intIntervalList.Utils. getLineageCount(IntervalList intervals, double t)Constructors in jebl.evolution.coalescent with parameters of type IntervalList Constructor Description Coalescent(IntervalList intervals, DemographicFunction demographicFunction)
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