Uses of Interface
org.biojava.nbio.structure.AminoAcid
Packages that use AminoAcid
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Uses of AminoAcid in org.biojava.nbio.structure
Classes in org.biojava.nbio.structure that implement AminoAcidMethods in org.biojava.nbio.structure that return AminoAcidModifier and TypeMethodDescriptionstatic AminoAcidStandardAminoAcid.getAminoAcid(String name) get a standard amino acid.Mutator.mutateResidue(AminoAcid oldAmino, String newType) create a new residue which is of the new type.Methods in org.biojava.nbio.structure with parameters of type AminoAcidModifier and TypeMethodDescriptionstatic final AtomCalc.createVirtualCBAtom(AminoAcid amino) creates a virtual C-beta atom.static final doubleCalculate the phi angle.static final doubleCalculate the psi angle.static final booleanCalc.isConnected(AminoAcid a, AminoAcid b) Test if two amino acids are connected, i.e.Mutator.mutateResidue(AminoAcid oldAmino, String newType) create a new residue which is of the new type.