Package org.biojava.nbio.structure.align.pairwise

Class AlignmentProgressListener

  • public class AlignmentProgressListener
extends java.lang.Object
    A class to listen to progress of the structure alignment calculations
    Author:
    andreas

    • Constructor Detail

      • AlignmentProgressListener

        public AlignmentProgressListener()

    • Method Detail

      • startingAlignment

        public void startingAlignment​(java.lang.String name1,
                              Atom[] ca1,
                              java.lang.String name2,
                              Atom[] ca2)

      • calculatedFragmentPairs

        public void calculatedFragmentPairs​(java.util.List<FragmentPair> fragments)

      • jointFragments

        public void jointFragments​(JointFragments[] fragments)