Package org.biojava.nbio.genome.parsers.genename

Class GeneName

  • All Implemented Interfaces:
    java.io.Serializable, java.lang.Comparable<GeneName>
    public class GeneName
extends java.lang.Object
implements java.io.Serializable, java.lang.Comparable<GeneName>
    A simple bean that contains gene name information as available from www.genenames.org
    Author:
    Andreas Prlic
    See Also:
    Serialized Form

    • Constructor Detail

      • GeneName

        public GeneName()

    • Method Detail

      • getHgncId

        public java.lang.String getHgncId()

      • setHgncId

        public void setHgncId​(java.lang.String hgncId)

      • getApprovedSymbol

        public java.lang.String getApprovedSymbol()

      • setApprovedSymbol

        public void setApprovedSymbol​(java.lang.String approvedSymbol)

      • getApprovedName

        public java.lang.String getApprovedName()

      • setApprovedName

        public void setApprovedName​(java.lang.String approvedName)

      • getStatus

        public java.lang.String getStatus()

      • setStatus

        public void setStatus​(java.lang.String status)

      • getPreviousSymbols

        public java.lang.String getPreviousSymbols()

      • setPreviousSymbols

        public void setPreviousSymbols​(java.lang.String previousSymbols)

      • getPreviousNames

        public java.lang.String getPreviousNames()

      • setPreviousNames

        public void setPreviousNames​(java.lang.String previousNames)

      • getSynonyms

        public java.lang.String getSynonyms()

      • setSynonyms

        public void setSynonyms​(java.lang.String synonyms)

      • getChromosome

        public java.lang.String getChromosome()

      • setChromosome

        public void setChromosome​(java.lang.String chromosome)

      • getAccessionNr

        public java.lang.String getAccessionNr()

      • setAccessionNr

        public void setAccessionNr​(java.lang.String accessionNr)

      • getRefseqIds

        public java.lang.String getRefseqIds()

      • setRefseqIds

        public void setRefseqIds​(java.lang.String refseqIds)

      • getUniprot

        public java.lang.String getUniprot()

      • setUniprot

        public void setUniprot​(java.lang.String uniprot)

      • getEnsemblGeneId

        public java.lang.String getEnsemblGeneId()

      • setEnsemblGeneId

        public void setEnsemblGeneId​(java.lang.String ensemblGeneId)

      • getOmimId

        public java.lang.String getOmimId()

      • setOmimId

        public void setOmimId​(java.lang.String omimId)

      • compareTo

        public int compareTo​(GeneName o)
        Specified by:
        compareTo in interface java.lang.Comparable<GeneName>

      • equals

        public boolean equals​(GeneName o)

      • toString

        public java.lang.String toString()
        Overrides:
        toString in class java.lang.Object