Constructor Detail

• SurvivalInfo

  public SurvivalInfo(double t,
                      int e)

  Parameters:

  t -

  e -

• SurvivalInfo

  public SurvivalInfo(double t,
                      int e,
                      java.util.LinkedHashMap<java.lang.String,java.lang.Double> d)

  Parameters:

  t -

  e -

  d -

• SurvivalInfo

  public SurvivalInfo(double t,
                      int e,
                      java.lang.String variable,
                      double d)

  Parameters:

  t -

  e -

  variable -

  d -

Method Detail

• setResidualVariable

  public void setResidualVariable(java.lang.String variable,
                                  java.lang.Double value)

  Set the residual value for the variable for this sample. Called from CoxScore.java

  Parameters:

  variable -

  value -

• getResidualVariable

  public java.lang.Double getResidualVariable(java.lang.String variable)

  Parameters:

  variable -

  Returns:

• getUnknownDataTypeVariable

  public java.lang.String getUnknownDataTypeVariable(java.lang.String variable)

  Parameters:

  variable -

  Returns:

• getOriginalMetaData

  public java.lang.String getOriginalMetaData(java.lang.String variable)

  Parameters:

  variable -

  Returns:

• addUnknownDataTypeVariable

  public void addUnknownDataTypeVariable(java.lang.String variable,
                                         java.lang.String value)

  Parameters:

  variable -

  value -

• updateContinousVariable

  public void updateContinousVariable(java.lang.String variable,
                                      java.lang.Double value)

  Parameters:

  variable -

  value -

• addContinuousVariable

  public void addContinuousVariable(java.lang.String variable,
                                    java.lang.Double value)

  Parameters:

  variable -

  value -

• getContinuousVariable

  public java.lang.Double getContinuousVariable(java.lang.String variable)

  Parameters:

  variable -

  Returns:

• getGroupCategories

  public java.util.ArrayList<java.lang.String> getGroupCategories(java.lang.String groupName)

  Parameters:

  groupName -

  Returns:

• getDataVariables

  public java.util.ArrayList<java.lang.String> getDataVariables()

  Returns:

• getNumberVariables

  public int getNumberVariables()

  Returns:

• getVariable

  public java.lang.Double getVariable(java.lang.String variable)

  Parameters:

  variable -

  Returns:

• toString

  public java.lang.String toString()

  Overrides:

  toString in class java.lang.Object

• compareTo

  public int compareTo(SurvivalInfo o)

  Specified by:

  compareTo in interface java.lang.Comparable<SurvivalInfo>

• getOffset

  public double getOffset()

  Returns:

  the offset

• setOffset

  public void setOffset(double offset)

  Parameters:

  offset - the offset to set

• getWeight

  public double getWeight()

  Returns:

  the weight

• setWeight

  public void setWeight(double weight)

  Parameters:

  weight - the weight to set

• getStrata

  public int getStrata()

  Returns:

  the strata

• setStrata

  public void setStrata(int strata)

  Parameters:

  strata - the strata to set

• getScore

  public double getScore()

  Returns:

  the score

• setScore

  public void setScore(double score)

  Parameters:

  score - the score to set

• getLinearPredictor

  public double getLinearPredictor()

  Returns:

  the linearPredictor

• setLinearPredictor

  public void setLinearPredictor(double linearPredictor)

  Parameters:

  linearPredictor - the linearPredictor to set

• getResidual

  public double getResidual()

  Returns:

  the residual

• setResidual

  public void setResidual(double residual)

  Parameters:

  residual - the residual to set

• getClusterValue

  public java.lang.String getClusterValue()

  Returns:

  the clusterValue

• setClusterValue

  public void setClusterValue(java.lang.String clusterValue)

  Parameters:

  clusterValue - the clusterValue to set

• getId

  public java.lang.String getId()

  Returns:

  the id

• setId

  public void setId(java.lang.String id)

  Parameters:

  id - the id to set

• getOrder

  public int getOrder()

  Returns:

  the order

• setOrder

  public void setOrder(int order)

  Parameters:

  order - the order to set

• getTime

  public double getTime()

  Returns:

  the time

• setTime

  public void setTime(double time)

  Parameters:

  time - the time to set

• getStatus

  public int getStatus()

  Returns:

  the status

• setStatus

  public void setStatus(int status)

  Parameters:

  status - the status to set