org.biojava.nbio.structure.symmetry.core

Class ClusterMerger

java.lang.Object

org.biojava.nbio.structure.symmetry.core.ClusterMerger

public class ClusterMerger
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
ClusterMerger(java.util.List<SequenceAlignmentCluster> clusters, QuatSymmetryParameters parameters)

Method Summary

Methods

Modifier and Type	Method and Description
void	calcPairwiseAlignments()
java.util.List<SequenceAlignmentCluster>	getMergedClusters(double sequenceIdentityCutoff)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ClusterMerger

public ClusterMerger(java.util.List<SequenceAlignmentCluster> clusters,
             QuatSymmetryParameters parameters)

Method Detail

calcPairwiseAlignments

public void calcPairwiseAlignments()

getMergedClusters

public java.util.List<SequenceAlignmentCluster> getMergedClusters(double sequenceIdentityCutoff)