org.forester.go.etc

Class MetaOntologizer

java.lang.Object

org.forester.go.etc.MetaOntologizer

public class MetaOntologizer
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
MetaOntologizer()

Method Summary

Methods

Modifier and Type	Method and Description
static void	reformat(java.io.File ontologizer_outdir, java.lang.String result_file_prefix, java.io.File domain_gain_loss_file, java.lang.String outfile_base, java.io.File obo_file, double p_adjusted_upper_limit, java.lang.String comment, java.util.List<PfamToGoMapping> pfam_to_go)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MetaOntologizer

public MetaOntologizer()

Method Detail

reformat

public static void reformat(java.io.File ontologizer_outdir,
            java.lang.String result_file_prefix,
            java.io.File domain_gain_loss_file,
            java.lang.String outfile_base,
            java.io.File obo_file,
            double p_adjusted_upper_limit,
            java.lang.String comment,
            java.util.List<PfamToGoMapping> pfam_to_go)
                     throws java.io.IOException

Throws:

java.io.IOException