org.biojava3.core.sequence

Class AccessionID

java.lang.Object

org.biojava3.core.sequence.AccessionID

public class AccessionID
extends java.lang.Object

Used in Sequences as the unique indentifier. If possible, set the DataSource to know the source of the id. This allows a SequenceProxy to gather features or related sequences Protein->Gene as an example. When parsing a Blast file it is also possible to identify the type of ID

Author:

Scooter Willis

Constructor Summary

Constructors

Constructor and Description
AccessionID()
AccessionID(java.lang.String id)
AccessionID(java.lang.String id, DataSource source)

Method Summary

Methods

Modifier and Type	Method and Description
boolean	equals(java.lang.Object o)
DataSource	getDataSource()
java.lang.String	getID()
int	hashCode()
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

AccessionID

public AccessionID()

AccessionID

public AccessionID(java.lang.String id)

Parameters:

id -

AccessionID

public AccessionID(java.lang.String id,
           DataSource source)

Parameters:

id -

source -

Method Detail

getID

public java.lang.String getID()

Returns:

the id

getDataSource

public DataSource getDataSource()

Returns:

the source

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object