org.biojava.bio.structure.align.ce

Class CeSideChainUserArgumentProcessor

java.lang.Object

org.biojava.bio.structure.align.ce.AbstractUserArgumentProcessor

org.biojava.bio.structure.align.ce.CeSideChainUserArgumentProcessor

All Implemented Interfaces:

UserArgumentProcessor

public class CeSideChainUserArgumentProcessor
extends AbstractUserArgumentProcessor

Field Summary

Fields inherited from class org.biojava.bio.structure.align.ce.AbstractUserArgumentProcessor

CACHE_DIR, mandatoryArgs, newline, params, PDB_DIR

Constructor Summary

Constructors

Constructor and Description
CeSideChainUserArgumentProcessor()

Method Summary

Methods

Modifier and Type	Method and Description
StructureAlignment	getAlgorithm()
java.lang.String	getDbSearchLegend()
java.lang.Object	getParameters()

Methods inherited from class org.biojava.bio.structure.align.ce.AbstractUserArgumentProcessor

getDbSearchResult, getMandatoryArgs, printAboutMe, process

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CeSideChainUserArgumentProcessor

public CeSideChainUserArgumentProcessor()

Method Detail

getAlgorithm

public StructureAlignment getAlgorithm()

Specified by:

getAlgorithm in class AbstractUserArgumentProcessor

getParameters

public java.lang.Object getParameters()

Specified by:

getParameters in class AbstractUserArgumentProcessor

getDbSearchLegend

public java.lang.String getDbSearchLegend()

Specified by:

getDbSearchLegend in class AbstractUserArgumentProcessor