org.biojava3.protmod.io

Class ProteinModificationXmlReader

java.lang.Object

org.biojava3.protmod.io.ProteinModificationXmlReader

public final class ProteinModificationXmlReader
extends java.lang.Object

Since:

3.0

Author:

Jianjiong Gao

Method Summary

Methods

Modifier and Type	Method and Description
static void	registerProteinModificationFromXml(java.io.InputStream isXml) Read protein modifications from XML file and register them.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

registerProteinModificationFromXml

public static void registerProteinModificationFromXml(java.io.InputStream isXml)
                                               throws java.io.IOException,
                                                      javax.xml.parsers.ParserConfigurationException,
                                                      org.xml.sax.SAXException

Read protein modifications from XML file and register them.

Parameters:

isXml - InputStream of the XML file.

Throws:

java.io.IOException - if failed to read the XML file.

javax.xml.parsers.ParserConfigurationException - if parse errors occur.

org.xml.sax.SAXException - the DocumentBuilder cannot be created.