org.biojava.bio.program

Class Meme

java.lang.Object

org.biojava.bio.program.Meme

public class Meme
extends java.lang.Object

The results of a meme run.

Author:

Matthew Pocock

Constructor Summary

Constructors

Constructor and Description
Meme(java.io.InputStream is, SymbolTokenization symParser)

Method Summary

Modifier and Type	Method and Description
java.util.List	getMotifs()
java.util.List	getSeqIDs()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Meme

public Meme(java.io.InputStream is,
            SymbolTokenization symParser)
     throws java.io.IOException,
            IllegalSymbolException,
            IllegalAlphabetException

Throws:

java.io.IOException

IllegalSymbolException

IllegalAlphabetException

Method Detail

getMotifs

public java.util.List getMotifs()

getSeqIDs

public java.util.List getSeqIDs()