org.biojava.naming

Class ObdaContext

java.lang.Object

org.biojava.naming.ObdaContext

All Implemented Interfaces:

javax.naming.Context, javax.naming.directory.DirContext

public class ObdaContext
extends java.lang.Object
implements javax.naming.directory.DirContext

Author:

Matthew Pocock

Field Summary

Fields inherited from interface javax.naming.directory.DirContext

ADD_ATTRIBUTE, REMOVE_ATTRIBUTE, REPLACE_ATTRIBUTE

Fields inherited from interface javax.naming.Context

APPLET, AUTHORITATIVE, BATCHSIZE, DNS_URL, INITIAL_CONTEXT_FACTORY, LANGUAGE, OBJECT_FACTORIES, PROVIDER_URL, REFERRAL, SECURITY_AUTHENTICATION, SECURITY_CREDENTIALS, SECURITY_PRINCIPAL, SECURITY_PROTOCOL, STATE_FACTORIES, URL_PKG_PREFIXES

Method Summary

Methods

Modifier and Type	Method and Description
java.lang.Object	addToEnvironment(java.lang.String propName, java.lang.Object propVal)
void	bind(javax.naming.Name name, java.lang.Object obj)
void	bind(javax.naming.Name name, java.lang.Object obj, javax.naming.directory.Attributes attrs)
void	bind(java.lang.String name, java.lang.Object obj)
void	bind(java.lang.String name, java.lang.Object obj, javax.naming.directory.Attributes attrs)
void	close()
javax.naming.Name	composeName(javax.naming.Name name, javax.naming.Name prefix)
java.lang.String	composeName(java.lang.String name, java.lang.String prefix)
javax.naming.Context	createSubcontext(javax.naming.Name name)
javax.naming.directory.DirContext	createSubcontext(javax.naming.Name name, javax.naming.directory.Attributes attrs)
javax.naming.Context	createSubcontext(java.lang.String name)
javax.naming.directory.DirContext	createSubcontext(java.lang.String name, javax.naming.directory.Attributes attrs)
void	destroySubcontext(javax.naming.Name name)
void	destroySubcontext(java.lang.String name)
javax.naming.directory.Attributes	getAttributes(javax.naming.Name name)
javax.naming.directory.Attributes	getAttributes(javax.naming.Name name, java.lang.String[] attrIds)
javax.naming.directory.Attributes	getAttributes(java.lang.String name)
javax.naming.directory.Attributes	getAttributes(java.lang.String name, java.lang.String[] attrIds)
java.util.Hashtable	getEnvironment()
protected javax.naming.Name	getMyComponents(javax.naming.Name name)
java.lang.String	getNameInNamespace()
javax.naming.NameParser	getNameParser(javax.naming.Name name)
javax.naming.NameParser	getNameParser(java.lang.String name)
javax.naming.directory.DirContext	getSchema(javax.naming.Name name)
javax.naming.directory.DirContext	getSchema(java.lang.String name)
javax.naming.directory.DirContext	getSchemaClassDefinition(javax.naming.Name name)
javax.naming.directory.DirContext	getSchemaClassDefinition(java.lang.String name)
javax.naming.NamingEnumeration	list(javax.naming.Name name)
javax.naming.NamingEnumeration	list(java.lang.String name)
javax.naming.NamingEnumeration	listBindings(javax.naming.Name name)
javax.naming.NamingEnumeration	listBindings(java.lang.String name)
java.lang.Object	lookup(javax.naming.Name name)
java.lang.Object	lookup(java.lang.String name)
java.lang.Object	lookupLink(javax.naming.Name name)
java.lang.Object	lookupLink(java.lang.String name)
void	modifyAttributes(javax.naming.Name name, int mod_op, javax.naming.directory.Attributes attrs)
void	modifyAttributes(javax.naming.Name name, javax.naming.directory.ModificationItem[] mods)
void	modifyAttributes(java.lang.String name, int mod_op, javax.naming.directory.Attributes attrs)
void	modifyAttributes(java.lang.String name, javax.naming.directory.ModificationItem[] mods)
void	rebind(javax.naming.Name name, java.lang.Object obj)
void	rebind(javax.naming.Name name, java.lang.Object obj, javax.naming.directory.Attributes attrs)
void	rebind(java.lang.String name, java.lang.Object obj)
void	rebind(java.lang.String name, java.lang.Object obj, javax.naming.directory.Attributes attrs)
java.lang.Object	removeFromEnvironment(java.lang.String propName)
void	rename(javax.naming.Name oldName, javax.naming.Name newName)
void	rename(java.lang.String oldName, java.lang.String newName)
javax.naming.NamingEnumeration	search(javax.naming.Name name, javax.naming.directory.Attributes matchingAttrs)
javax.naming.NamingEnumeration	search(javax.naming.Name name, javax.naming.directory.Attributes matchingAttributes, java.lang.String[] attributesToReturn)
javax.naming.NamingEnumeration	search(javax.naming.Name name, java.lang.String filterExpr, java.lang.Object[] filterArgs, javax.naming.directory.SearchControls cons)
javax.naming.NamingEnumeration	search(javax.naming.Name name, java.lang.String filter, javax.naming.directory.SearchControls cons)
javax.naming.NamingEnumeration	search(java.lang.String name, javax.naming.directory.Attributes matchingAttributes)
javax.naming.NamingEnumeration	search(java.lang.String name, javax.naming.directory.Attributes matchingAttributes, java.lang.String[] attributesToReturn)
javax.naming.NamingEnumeration	search(java.lang.String name, java.lang.String filterExpr, java.lang.Object[] filterArgs, javax.naming.directory.SearchControls cons)
javax.naming.NamingEnumeration	search(java.lang.String name, java.lang.String filter, javax.naming.directory.SearchControls cons)
void	unbind(javax.naming.Name name)
void	unbind(java.lang.String name)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

getMyComponents

protected javax.naming.Name getMyComponents(javax.naming.Name name)
                                     throws javax.naming.NamingException

Throws:

javax.naming.NamingException

getNameInNamespace

public java.lang.String getNameInNamespace()
                                    throws javax.naming.NamingException

Specified by:

getNameInNamespace in interface javax.naming.Context

Throws:

javax.naming.NamingException

composeName

public javax.naming.Name composeName(javax.naming.Name name,
                            javax.naming.Name prefix)
                              throws javax.naming.NamingException

Specified by:

composeName in interface javax.naming.Context

Throws:

javax.naming.NamingException

lookup

public java.lang.Object lookup(javax.naming.Name name)
                        throws javax.naming.NamingException

Specified by:

lookup in interface javax.naming.Context

Throws:

javax.naming.NamingException

list

public javax.naming.NamingEnumeration list(javax.naming.Name name)
                                    throws javax.naming.NamingException

Specified by:

list in interface javax.naming.Context

Throws:

javax.naming.NamingException

listBindings

public javax.naming.NamingEnumeration listBindings(javax.naming.Name name)
                                            throws javax.naming.NamingException

Specified by:

listBindings in interface javax.naming.Context

Throws:

javax.naming.NamingException

bind

public void bind(javax.naming.Name name,
        java.lang.Object obj)
          throws javax.naming.NamingException

Specified by:

bind in interface javax.naming.Context

Throws:

javax.naming.NamingException

rebind

public void rebind(javax.naming.Name name,
          java.lang.Object obj)
            throws javax.naming.NamingException

Specified by:

rebind in interface javax.naming.Context

Throws:

javax.naming.NamingException

unbind

public void unbind(javax.naming.Name name)
            throws javax.naming.NamingException

Specified by:

unbind in interface javax.naming.Context

Throws:

javax.naming.NamingException

rename

public void rename(javax.naming.Name oldName,
          javax.naming.Name newName)
            throws javax.naming.NamingException

Specified by:

rename in interface javax.naming.Context

Throws:

javax.naming.NamingException

createSubcontext

public javax.naming.Context createSubcontext(javax.naming.Name name)
                                      throws javax.naming.NamingException

Specified by:

createSubcontext in interface javax.naming.Context

Throws:

javax.naming.NamingException

destroySubcontext

public void destroySubcontext(javax.naming.Name name)
                       throws javax.naming.NamingException

Specified by:

destroySubcontext in interface javax.naming.Context

Throws:

javax.naming.NamingException

getNameParser

public javax.naming.NameParser getNameParser(javax.naming.Name name)
                                      throws javax.naming.NamingException

Specified by:

getNameParser in interface javax.naming.Context

Throws:

javax.naming.NamingException

composeName

public java.lang.String composeName(java.lang.String name,
                           java.lang.String prefix)
                             throws javax.naming.NamingException

Specified by:

composeName in interface javax.naming.Context

Throws:

javax.naming.NamingException

addToEnvironment

public java.lang.Object addToEnvironment(java.lang.String propName,
                                java.lang.Object propVal)
                                  throws javax.naming.NamingException

Specified by:

addToEnvironment in interface javax.naming.Context

Throws:

javax.naming.NamingException

removeFromEnvironment

public java.lang.Object removeFromEnvironment(java.lang.String propName)
                                       throws javax.naming.NamingException

Specified by:

removeFromEnvironment in interface javax.naming.Context

Throws:

javax.naming.NamingException

getEnvironment

public java.util.Hashtable getEnvironment()
                                   throws javax.naming.NamingException

Specified by:

getEnvironment in interface javax.naming.Context

Throws:

javax.naming.NamingException

close

public void close()
           throws javax.naming.NamingException

Specified by:

close in interface javax.naming.Context

Throws:

javax.naming.NamingException

list

public javax.naming.NamingEnumeration list(java.lang.String name)
                                    throws javax.naming.NamingException

Specified by:

list in interface javax.naming.Context

Throws:

javax.naming.NamingException

listBindings

public javax.naming.NamingEnumeration listBindings(java.lang.String name)
                                            throws javax.naming.NamingException

Specified by:

listBindings in interface javax.naming.Context

Throws:

javax.naming.NamingException

lookup

public java.lang.Object lookup(java.lang.String name)
                        throws javax.naming.NamingException

Specified by:

lookup in interface javax.naming.Context

Throws:

javax.naming.NamingException

lookupLink

public java.lang.Object lookupLink(javax.naming.Name name)
                            throws javax.naming.NamingException

Specified by:

lookupLink in interface javax.naming.Context

Throws:

javax.naming.NamingException

getAttributes

public javax.naming.directory.Attributes getAttributes(javax.naming.Name name)
                                                throws javax.naming.NamingException

Specified by:

getAttributes in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

getAttributes

public javax.naming.directory.Attributes getAttributes(javax.naming.Name name,
                                              java.lang.String[] attrIds)
                                                throws javax.naming.NamingException

Specified by:

getAttributes in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

modifyAttributes

public void modifyAttributes(javax.naming.Name name,
                    int mod_op,
                    javax.naming.directory.Attributes attrs)
                      throws javax.naming.NamingException

Specified by:

modifyAttributes in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

modifyAttributes

public void modifyAttributes(javax.naming.Name name,
                    javax.naming.directory.ModificationItem[] mods)
                      throws javax.naming.NamingException

Specified by:

modifyAttributes in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

bind

public void bind(javax.naming.Name name,
        java.lang.Object obj,
        javax.naming.directory.Attributes attrs)
          throws javax.naming.NamingException

Specified by:

bind in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

rebind

public void rebind(javax.naming.Name name,
          java.lang.Object obj,
          javax.naming.directory.Attributes attrs)
            throws javax.naming.NamingException

Specified by:

rebind in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

createSubcontext

public javax.naming.directory.DirContext createSubcontext(javax.naming.Name name,
                                                 javax.naming.directory.Attributes attrs)
                                                   throws javax.naming.NamingException

Specified by:

createSubcontext in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

getSchema

public javax.naming.directory.DirContext getSchema(javax.naming.Name name)
                                            throws javax.naming.NamingException

Specified by:

getSchema in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

getSchemaClassDefinition

public javax.naming.directory.DirContext getSchemaClassDefinition(javax.naming.Name name)
                                                           throws javax.naming.NamingException

Specified by:

getSchemaClassDefinition in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

search

public javax.naming.NamingEnumeration search(javax.naming.Name name,
                                    javax.naming.directory.Attributes matchingAttrs)
                                      throws javax.naming.NamingException

Specified by:

search in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

search

public javax.naming.NamingEnumeration search(javax.naming.Name name,
                                    java.lang.String filterExpr,
                                    java.lang.Object[] filterArgs,
                                    javax.naming.directory.SearchControls cons)
                                      throws javax.naming.NamingException

Specified by:

search in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

search

public javax.naming.NamingEnumeration search(javax.naming.Name name,
                                    javax.naming.directory.Attributes matchingAttributes,
                                    java.lang.String[] attributesToReturn)
                                      throws javax.naming.NamingException

Specified by:

search in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

search

public javax.naming.NamingEnumeration search(javax.naming.Name name,
                                    java.lang.String filter,
                                    javax.naming.directory.SearchControls cons)
                                      throws javax.naming.NamingException

Specified by:

search in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

bind

public void bind(java.lang.String name,
        java.lang.Object obj)
          throws javax.naming.NamingException

Specified by:

bind in interface javax.naming.Context

Throws:

javax.naming.NamingException

rebind

public void rebind(java.lang.String name,
          java.lang.Object obj)
            throws javax.naming.NamingException

Specified by:

rebind in interface javax.naming.Context

Throws:

javax.naming.NamingException

unbind

public void unbind(java.lang.String name)
            throws javax.naming.NamingException

Specified by:

unbind in interface javax.naming.Context

Throws:

javax.naming.NamingException

rename

public void rename(java.lang.String oldName,
          java.lang.String newName)
            throws javax.naming.NamingException

Specified by:

rename in interface javax.naming.Context

Throws:

javax.naming.NamingException

createSubcontext

public javax.naming.Context createSubcontext(java.lang.String name)
                                      throws javax.naming.NamingException

Specified by:

createSubcontext in interface javax.naming.Context

Throws:

javax.naming.NamingException

destroySubcontext

public void destroySubcontext(java.lang.String name)
                       throws javax.naming.NamingException

Specified by:

destroySubcontext in interface javax.naming.Context

Throws:

javax.naming.NamingException

getNameParser

public javax.naming.NameParser getNameParser(java.lang.String name)
                                      throws javax.naming.NamingException

Specified by:

getNameParser in interface javax.naming.Context

Throws:

javax.naming.NamingException

lookupLink

public java.lang.Object lookupLink(java.lang.String name)
                            throws javax.naming.NamingException

Specified by:

lookupLink in interface javax.naming.Context

Throws:

javax.naming.NamingException

getAttributes

public javax.naming.directory.Attributes getAttributes(java.lang.String name)
                                                throws javax.naming.NamingException

Specified by:

getAttributes in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

getAttributes

public javax.naming.directory.Attributes getAttributes(java.lang.String name,
                                              java.lang.String[] attrIds)
                                                throws javax.naming.NamingException

Specified by:

getAttributes in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

modifyAttributes

public void modifyAttributes(java.lang.String name,
                    int mod_op,
                    javax.naming.directory.Attributes attrs)
                      throws javax.naming.NamingException

Specified by:

modifyAttributes in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

modifyAttributes

public void modifyAttributes(java.lang.String name,
                    javax.naming.directory.ModificationItem[] mods)
                      throws javax.naming.NamingException

Specified by:

modifyAttributes in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

bind

public void bind(java.lang.String name,
        java.lang.Object obj,
        javax.naming.directory.Attributes attrs)
          throws javax.naming.NamingException

Specified by:

bind in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

rebind

public void rebind(java.lang.String name,
          java.lang.Object obj,
          javax.naming.directory.Attributes attrs)
            throws javax.naming.NamingException

Specified by:

rebind in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

createSubcontext

public javax.naming.directory.DirContext createSubcontext(java.lang.String name,
                                                 javax.naming.directory.Attributes attrs)
                                                   throws javax.naming.NamingException

Specified by:

createSubcontext in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

getSchema

public javax.naming.directory.DirContext getSchema(java.lang.String name)
                                            throws javax.naming.NamingException

Specified by:

getSchema in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

getSchemaClassDefinition

public javax.naming.directory.DirContext getSchemaClassDefinition(java.lang.String name)
                                                           throws javax.naming.NamingException

Specified by:

getSchemaClassDefinition in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

search

public javax.naming.NamingEnumeration search(java.lang.String name,
                                    javax.naming.directory.Attributes matchingAttributes,
                                    java.lang.String[] attributesToReturn)
                                      throws javax.naming.NamingException

Specified by:

search in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

search

public javax.naming.NamingEnumeration search(java.lang.String name,
                                    javax.naming.directory.Attributes matchingAttributes)
                                      throws javax.naming.NamingException

Specified by:

search in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

search

public javax.naming.NamingEnumeration search(java.lang.String name,
                                    java.lang.String filter,
                                    javax.naming.directory.SearchControls cons)
                                      throws javax.naming.NamingException

Specified by:

search in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException

search

public javax.naming.NamingEnumeration search(java.lang.String name,
                                    java.lang.String filterExpr,
                                    java.lang.Object[] filterArgs,
                                    javax.naming.directory.SearchControls cons)
                                      throws javax.naming.NamingException

Specified by:

search in interface javax.naming.directory.DirContext

Throws:

javax.naming.NamingException