org.biojava.bio.structure.gui

Class BiojavaJmol

java.lang.Object

org.biojava.bio.structure.gui.BiojavaJmol

public class BiojavaJmol
extends java.lang.Object

A class that provides a simple GUI for Jmol

Since:

1.6

Author:

Andreas Prlic

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	adapter
static java.lang.String	smartAdapter
static java.lang.String	viewer

Constructor Summary

Constructors

Constructor and Description
BiojavaJmol()

Method Summary

Methods

Modifier and Type	Method and Description
void	evalString(java.lang.String rasmolScript)
static boolean	jmolInClassPath() returns true if Jmol can be found in the classpath, otherwise false.
static void	main(java.lang.String[] args)
void	setStructure(Structure s)
void	setTitle(java.lang.String label)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

viewer

public static final java.lang.String viewer

See Also:

Constant Field Values

adapter

public static final java.lang.String adapter

See Also:

Constant Field Values

smartAdapter

public static final java.lang.String smartAdapter

See Also:

Constant Field Values

Constructor Detail

BiojavaJmol

public BiojavaJmol()

Method Detail

main

public static void main(java.lang.String[] args)

jmolInClassPath

public static boolean jmolInClassPath()

returns true if Jmol can be found in the classpath, otherwise false.

Returns:

true/false depending if Jmol can be found

evalString

public void evalString(java.lang.String rasmolScript)

setStructure

public void setStructure(Structure s)

setTitle

public void setTitle(java.lang.String label)