org.biojava.bio.seq.io.game

Class GAMEResiduesPropHandler

java.lang.Object

org.biojava.utils.stax.StAXContentHandlerBase

org.biojava.bio.seq.io.game.SequenceContentHandlerBase

org.biojava.bio.seq.io.game.GAMEResiduesPropHandler

All Implemented Interfaces:

StAXContentHandler

public class GAMEResiduesPropHandler
extends SequenceContentHandlerBase

StAX handler for GAME <residues> elements. derived from Thomas Down's PropDetailHandler

This takes the sequence supplied by <residues> elements and feeds it to a StreamParser associated with a SeqIOLIstener instance.

Since:

1.8

Author:

David Huen, Thomas Down

Field Summary

Fields

Modifier and Type	Field and Description
static StAXHandlerFactory	GAME_RESIDUES_PROP_HANDLER_FACTORY

Constructor Summary

Constructors

Constructor and Description
GAMEResiduesPropHandler(StAXFeatureHandler staxenv)

Method Summary

Methods

Modifier and Type	Method and Description
void	startElement(java.lang.String nsURI, java.lang.String localName, java.lang.String qName, org.xml.sax.Attributes attrs, DelegationManager dm)

Methods inherited from class org.biojava.bio.seq.io.game.SequenceContentHandlerBase

characters, endElement, setStreamParser

Methods inherited from class org.biojava.utils.stax.StAXContentHandlerBase

endPrefixMapping, endTree, ignorableWhitespace, processingInstruction, setDocumentLocator, skippedEntity, startPrefixMapping, startTree

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

GAME_RESIDUES_PROP_HANDLER_FACTORY

public static final StAXHandlerFactory GAME_RESIDUES_PROP_HANDLER_FACTORY

Constructor Detail

GAMEResiduesPropHandler

public GAMEResiduesPropHandler(StAXFeatureHandler staxenv)

Method Detail

startElement

public void startElement(java.lang.String nsURI,
                java.lang.String localName,
                java.lang.String qName,
                org.xml.sax.Attributes attrs,
                DelegationManager dm)
                  throws org.xml.sax.SAXException

Specified by:

startElement in interface StAXContentHandler

Overrides:

startElement in class SequenceContentHandlerBase

Throws:

org.xml.sax.SAXException