bamRecordStruct Struct Reference

Structure of a BAM record. More...

#include <SamRecord.h>

Public Attributes
int32_t	myBlockSize
int32_t	myReferenceID
int32_t	myPosition
uint32_t	myReadNameLength: 8
uint32_t	myMapQuality: 8
uint32_t	myBin: 16
uint32_t	myCigarLength: 16
uint32_t	myFlag: 16
int32_t	myReadLength
int32_t	myMateReferenceID
int32_t	myMatePosition
int32_t	myInsertSize
char	myData [1]

Detailed Description

Structure of a BAM record.

Definition at line 33 of file SamRecord.h.

Member Data Documentation

myBin

uint32_t bamRecordStruct::myBin

Definition at line 39 of file SamRecord.h.

myBlockSize

int32_t bamRecordStruct::myBlockSize

Definition at line 36 of file SamRecord.h.

myCigarLength

uint32_t bamRecordStruct::myCigarLength

Definition at line 40 of file SamRecord.h.

myData

char bamRecordStruct::myData[1]

Definition at line 45 of file SamRecord.h.

myFlag

uint32_t bamRecordStruct::myFlag

Definition at line 40 of file SamRecord.h.

myInsertSize

int32_t bamRecordStruct::myInsertSize

Definition at line 44 of file SamRecord.h.

myMapQuality

uint32_t bamRecordStruct::myMapQuality

Definition at line 39 of file SamRecord.h.

myMatePosition

int32_t bamRecordStruct::myMatePosition

Definition at line 43 of file SamRecord.h.

myMateReferenceID

int32_t bamRecordStruct::myMateReferenceID

Definition at line 42 of file SamRecord.h.

myPosition

int32_t bamRecordStruct::myPosition

Definition at line 38 of file SamRecord.h.

myReadLength

int32_t bamRecordStruct::myReadLength

Definition at line 41 of file SamRecord.h.

myReadNameLength

uint32_t bamRecordStruct::myReadNameLength

Definition at line 39 of file SamRecord.h.

myReferenceID

int32_t bamRecordStruct::myReferenceID

Definition at line 37 of file SamRecord.h.

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The documentation for this struct was generated from the following file:

• bam/SamRecord.h