org.jmol.modelsetbio

Class Sheet

java.lang.Object

org.jmol.modelsetbio.ProteinStructure

org.jmol.modelsetbio.Sheet

public class Sheet
extends ProteinStructure

Field Summary

Fields

Modifier and Type	Field and Description
(package private) AlphaPolymer	alphaPolymer
(package private) javax.vecmath.Vector3f	heightUnitVector
(package private) javax.vecmath.Vector3f	widthUnitVector

Fields inherited from class org.jmol.modelsetbio.ProteinStructure

apolymer, axisA, axisB, axisUnitVector, globalSerialID, monomerCount, monomerIndexFirst, monomerIndexLast, segments, serialID, strandCount, structureID, subtype, type, uniqueID, vectorProjection

Constructor Summary

Constructors

Constructor and Description
Sheet(AlphaPolymer alphaPolymer, int monomerIndex, int monomerCount, int id, EnumStructure subtype)

Method Summary

Methods

Modifier and Type	Method and Description
void	calcAxis()
(package private) void	calcSheetUnitVectors()
javax.vecmath.Vector3f	getHeightUnitVector()
javax.vecmath.Vector3f	getWidthUnitVector()

Methods inherited from class org.jmol.modelsetbio.ProteinStructure

addMonomer, calcSegments, getAxisEndPoint, getAxisStartPoint, getIndex, getInfo, getMonomerCount, getMonomerIndex, getSegments, getStructureMidPoint, isWithin, lowerNeighborIsHelixOrSheet, removeMonomer, resetAxes, upperNeighborIsHelixOrSheet

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

alphaPolymer

AlphaPolymer alphaPolymer

widthUnitVector

javax.vecmath.Vector3f widthUnitVector

heightUnitVector

javax.vecmath.Vector3f heightUnitVector

Constructor Detail

Sheet

Sheet(AlphaPolymer alphaPolymer,
     int monomerIndex,
     int monomerCount,
     int id,
     EnumStructure subtype)

Method Detail

calcAxis

public void calcAxis()

Overrides:

calcAxis in class ProteinStructure

calcSheetUnitVectors

void calcSheetUnitVectors()

getWidthUnitVector

public javax.vecmath.Vector3f getWidthUnitVector()

getHeightUnitVector

public javax.vecmath.Vector3f getHeightUnitVector()