Package htsjdk.samtools.filter
Class FilteringIterator
java.lang.Object
htsjdk.samtools.filter.FilteringSamIterator
htsjdk.samtools.filter.FilteringIterator
- All Implemented Interfaces:
CloseableIterator<SAMRecord>,Closeable,AutoCloseable,Iterator<SAMRecord>
Deprecated.
Filtering Iterator which takes a filter and an iterator and iterates through only those records
which are not rejected by the filter.
$Id$
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Constructor Summary
ConstructorsConstructorDescriptionFilteringIterator(Iterator<SAMRecord> iterator, SamRecordFilter filter) Deprecated.FilteringIterator(Iterator<SAMRecord> iterator, SamRecordFilter filter, boolean filterByPair) Deprecated. -
Method Summary
Methods inherited from class htsjdk.samtools.filter.FilteringSamIterator
close, hasNext, next, removeMethods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, waitMethods inherited from interface htsjdk.samtools.util.CloseableIterator
stream, toListMethods inherited from interface java.util.Iterator
forEachRemaining
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Constructor Details
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FilteringIterator
public FilteringIterator(Iterator<SAMRecord> iterator, SamRecordFilter filter, boolean filterByPair) Deprecated. -
FilteringIterator
Deprecated.
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FilteringSamIteratorinstead