ContentDigests (htsjdk 4.3.0 API)

java.lang.Object

htsjdk.samtools.cram.digest.ContentDigests

public final class ContentDigests extends Object

Nested Class Summary

Nested Classes

Modifier and Type

Class

Description

static enum

ContentDigests.KNOWN_DIGESTS
Field Summary

Fields

Modifier and Type

Field

Description

static final EnumSet<ContentDigests.KNOWN_DIGESTS>

ALL

static final EnumSet<ContentDigests.KNOWN_DIGESTS>

CRC32
Method Summary

Modifier and Type

Method

Description

void

add(CRAMCompressionRecord record)

static ContentDigests

create(SAMBinaryTagAndValue binaryTags)

static ContentDigests

create(EnumSet<ContentDigests.KNOWN_DIGESTS> requestedDigests)

SAMBinaryTagAndValue

getAsTags()

boolean

test(SAMBinaryTagAndValue tags)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details
- ALL
  
  public static final EnumSet<ContentDigests.KNOWN_DIGESTS> ALL
- CRC32
  
  public static final EnumSet<ContentDigests.KNOWN_DIGESTS> CRC32
Method Details
- create
  
  public static ContentDigests create(EnumSet<ContentDigests.KNOWN_DIGESTS> requestedDigests)
- create
  
  public static ContentDigests create(SAMBinaryTagAndValue binaryTags)
- add
  
  public void add(CRAMCompressionRecord record)
- getAsTags
  
  public SAMBinaryTagAndValue getAsTags()
- test
  
  public boolean test(SAMBinaryTagAndValue tags)