RefSkip (htsjdk 2.24.1 API)

java.lang.Object
- htsjdk.samtools.cram.encoding.readfeatures.RefSkip

All Implemented Interfaces:

ReadFeature, Serializable
```
public class RefSkip
extends Object
implements Serializable, ReadFeature
```
A read feature representing a reference skip similar to CigarOperator.N.

See Also:

Serialized Form

Field Summary

Fields
Modifier and Type Field Description

static byte operator

Constructor Summary

Constructors
Constructor Description

RefSkip(int position, int length)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`boolean`	`equals(Object o)`
`int`	`getLength()`
`byte`	`getOperator()`	Read features are distinguished by operator, similar to cigar operator.
`int`	`getPosition()`
`int`	`hashCode()`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

- Field Detail
  - operator
```
public static final byte operator
```
    See Also:
    
    Constant Field Values
- Constructor Detail
  - RefSkip
```
public RefSkip(int position,
               int length)
```
- Method Detail
  - getOperator
```
public byte getOperator()
```
    Description copied from interface: ReadFeature
    
    Read features are distinguished by operator, similar to cigar operator.
    
    Specified by:
    
    getOperator in interface ReadFeature
    
    Returns:
    
    type of the read feature
  - getPosition
```
public int getPosition()
```
    Specified by:
    
    getPosition in interface ReadFeature
    
    Returns:
    
    zero-based position in the read
  - getLength
```
public int getLength()
```
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Object
  - equals
```
public boolean equals(Object o)
```
    Overrides:
    
    equals in class Object
  - hashCode
```
public int hashCode()
```
    Overrides:
    
    hashCode in class Object